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Jeanette Papp, Ph.D.
Affiliations
Director, Genotyping & Sequencing Core (GenoSeq)
Adjunct Associate Professor, Human Genetics
Member, Center for Autism Research and Treatment (CART)
Education:
Degree: Ph.D.
Contact Information:
Email Address: jcpapp@ucla.edu
Work Address: Office
Gonda Center
695 Charles E. Young Drive South
Los Angeles, CA 90095
UNITED STATES
Work Address: Laboratory
Gonda Center
Los Angeles, CA 90095
UNITED STATES
Laboratory: http://www.genoseq.ucla.edu
Direct Contact Information:
Work Phone Number: 310-267-2461, 310-825-5488 Laboratory
310-825-6204 Office
Additional Information:

Bioinformatics in Human Genetics
Dr. Papp is the Director of the UCLA Genotyping and Sequencing Core (GenoSeq), and a member of the UCLA Bioinformatics Core. She came to UCLA in 2000. Prior to that she worked at genome centers in Paris and Oxford. In addition to overseeing data generation and analysis in the Core, her research interests include developing novel bioinformatic solutions for the management and analysis of all types of genetic data within the Department of Human Genetics.

Publications:
Anderson SL, Chung WK, Frezzo J, Papp JC, Ekstein J, Dimauro S, Rubin BY. (2009) A novel mutation in NDUFS4 causes Leigh syndrome in an Ashkenazi Jewish family. J Inherit Metab Dis. 2009; [Epub ahead of print]: .
Sehl ME, Langer LR, Papp JC, Kwan L, Seldon JL, Arellano G, Reiss J, Reed EF, Dandekar S, Korin Y, Sinsheimer JS, Zhang ZF, Ganz PA. Associations between Single Nucleotide Polymorphisms in Double-Stranded DNA Repair Pathway Genes and Familial Breast Cancer. Clin Cancer Res 2009; 15: 2192-2203.
Presson AP, Sobel EM, Pajukanta P, Plaisier C, Weeks DE, Aberg K, Papp JC. Merging microsatellite data: enhanced methodology and software to combine genotype data for linkage and association analysis. BMC Bioinformatics 2008; 9: 317.
Lee YC, Morgenstern H, Greenland S, Tashkin DP, Papp J, Sinsheimer J, Cao W, Hashibe M, You NC, Mao JT, Cozen W, Mack TM, Zhang ZF A case-control study of the association of the polymorphisms and haplotypes of DNA ligase I with lung and upper-aerodigestive-tract cancers. Int J Cancer 2008; 122(7): 1630-1638.
Arumugaswami V, Sitapara R, Hwang S, Song MJ, Ho TN, Su NQ, Sue EY, Kanagavel V, Xing F, Zhang X, Zhao M, Deng H, Wu T, Kanagavel S, Zhang L, Dandekar S, Papp J, Sun R. High-resolution Functional Profiling of a Gammaherpesvirus RTA Locus in the Context of the Viral Genome. J Virol. 2008; 83: 1811.
Presson AP, Sobel EM, Papp JC, Suarez CJ, Whistler T, Rajeevan MS, Vernon SD, Horvath S. Integrated weighted gene co-expression network analysis with an application to chronic fatigue syndrome. BMC Systems Biology 2008; 2: 95.
Aldave AJ, Sonmez B, Bourla N, Schultz G, Papp JC, Salem AK, Rayner SA, Yellore VS Autosomal dominant cornea plana is not associated with pathogenic mutations in DCN, DSPG3, FOXC1, KERA, LUM, or PITX2. Ophthalmic Genet 2007; 28: 57-67.
Yellore VS, Papp J, Sobel E, Khan MA, Rayner SA, Farber DB, Aldave AJ. Replication and Refinement of Linkage of Posterior Polymorphous Corneal Dystrophy to the PPCD1 Locus on Chromosome 20. Genetics in Medicine 2007; 9: 228-234.
Presson A, Sobel E, Lange, K. Papp JC. Merging Microsatellite Data. Journal of Computational Biology 2006; 13: 1131-1147.
Kaunisto MA, Tikka PJ, Kallela M, Leal SM, Papp JC, Korhonen A, Hamalainen E, Harno H, Havanka H, Nissila M, Sako E, Ilmavirta M, Kaprio J, Farkkila M, Ophoff RA, Palotie A, Wessman M Chromosome 19p13 loci in Finnish migraine with aura families . Am J Med Genet B Neuropsychiatr Genet 2005; 132B(1): 85-89.
Caulfield M, Munroe P, Pembroke J, Samani N, Dominiczak A, Brown M, Benjamin N, Webster J, Ratcliffe P, O'Shea S, Papp J, Taylor E, Knight J, Newhouse S, Hooper J, Lee W, Brain N, Clayton D, Lathrop GM, Farrall M, Connell J. Genome-wide mapping of human QTLs for essential hypertension. Lancet. 2003; 21(361(9375)): 2118-23.
Wessman M, Kallela M, Kaunisto MA, Marttila P, Sobel E, Hartiala J, Oswell G, Leal SM, Papp JC, Hamalainen E, Broas P, Joslyn G, Hovatta I, Hiekkalinna T, Kaprio J, Ott J, Cantor RM, Zwart JA, Ilmavirta M, Havanka H, Farkkila M, Peltonen L, Palotie A A susceptibility locus for migraine with aura, on chromosome 4q24. Am J Hum Genet. 2002; 70(3): 652-62.
Holm P, Senee V, Julier C, Kockum I, Blanc H, Papp J, Bartsocas C, Dahlquist G, Mato E, de Leiva A, Lathrop M, Luthman H, Nerup J, Pociot F, Ranningen K, Akesson K A genome-wide scan for type 1-diabetes susceptibility genes in Scandinavian families: Identification of new loci with evidence of interactions. Am J Hum Genet. 2001; 69: 1301-1313.
Magre J, Delepine M, Khallouf E, Gedde-Dahl T Jr, Van Maldergem L, Sobel E, Papp J, Meier M, Megarbane A, Bachy A, Verloes A, d'Abronzo FH, Seemanova E, Assan R, Baudic N, Bourut C, Czernichow P, Huet F, Grigorescu F, de Kerdanet M, Lacombe D, Labrun Identification of the gene altered in Berardinelli-Seip congenital lipodystrophy on chromosome 11q13. Nature Genetics. 2001; 28(4): 365 - 370.
Novak U, Oppliger Leibundgut E, Hager J, Muhlematter D, Jotterand M, Besse C, Leupin N, Ratschiller D, Papp J, Kearsey G, Aebi S, Graber H, Jaggi R, Luthi JM, Meyer-Monard S, Lathrop M, Tobler A, Fey MF A high-resolution allelotype of B-cell chronic lymphocytic leukemia (B-CLL). Blood. 2002; 100(5): 1787-94.
Sobel E, Papp JC, Lange K Detection and integration of genotyping errors in statistical genetics. Am J Hum Genet. 2002; 70(2): 496-508.


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